海洋稀有放线菌的选择性分离方法
PDF下载 (391)原 野,何 山*.海洋稀有放线菌的选择性分离方法[J].宁波大学学报(理工版),2014,27(03):12-17.DOI:
YUAN Ye,HE Shan*.Selective Isolations of Marine Rare Actinomycetes[J].Journal of Ningbo University(Natural Science & Engineering Edition),2014,27(03):12-17.DOI:
| Title: | Selective Isolations of Marine Rare Actinomycetes |
| 作者: | 原 野, 何 山* |
| Author(s): | YUAN Ye, HE Shan* |
| 关键词: | 海洋稀有放线菌; 选择性分离; 高通量培养; 原位富集培养 |
| Keywords: | marine rare Actinomycetes; selective isolation; high-throughput culture; in situ cultivation |
| 分类号: | — |
| 文献标识码: | A |
| 摘要: | 介绍了当前海洋稀有放线菌分离中对样品常用的预处理和富集技术、培养基及抑制剂的选择方法以及高通量/原位富集培养技术, 指出了海洋稀有放线菌选择性分离方法的重点改进方向, 以进一步促进海洋难培养微生物资源的开发和利用. |
| Abstract: | During last two decades, marine rare actinomycetes has become research focus for natural products development due to their significant biodiversity and particular secondary metabolites. However, the further research has been largely limited by hardship in obtaining pure culture with traditional methods. This review summarizes the pretreatments and enrichments of the samples and the selection of medium and antimicrobial agents. The high-throughput and in-situ culturing techniques are also introduced |
| 参考文献 /References: | [1].Berdy J. Bioactivemicrobial metabolites[J]. J Antibiot (Tokyo), 2005, 58:1-26. [2].Baltz R H. Marcel faber roundtable: Is our antibiotic pipeline unproductive because of starvation, constipation or lack of inspiration?[J]. J Ind Microbiol Biotechnol, 2006, 33:507-513. [3].Goodfellow M, Williams E. New strategies for the selective isolation of industrially important bacteria[J]. Biotechnol Genet Eng Rev, 1986(4):213-262. [4].阮继生, 黄英. 放线菌快速鉴定与系统分类[M]北京 科学出版社, 2011:27 [5].Cragg G M, Newman D J. Biodiversity: A continuing source of novel drug leads[J]. Pure Appl Chem, 2005, 77:7-24. [6].Fenical W, Jensen P R. Developing a new resource for drug discovery: Marine actinomycete bacteria[J]. Nat Chem Biol, 2006(2):666-673. [7].常显波, 刘文正, 尹琦,. 海洋放线菌不同分离方法的比较研究[J]. 海洋科学, 2012, 36(8):35-39. [8].Kim C J, Lee K H, Shimazu A, . Isolation of rare Actinomycetes in various types of soil[J]. J Appl Microbiol Biotechnol, 1995, 23:36-42. [9].李文均, 张忠泽, 姜成林. 几种主要稀有放线菌的选择性分离[J]. 国外医药抗生素分册. 2002, 23(1):18-22. [10].Hayakawa M, Kajiura T, Nonomura H. New methods for the highly selective isolation of Streptosporangium and Dactylosporangium from soil[J]. J Ferment Bioeng, 1991, 72:327333. [11].Hayakawa M, Yoshida Y, Iimura Y. Selection of bioactive soil Actinomycetes belonging to the Streptomyces violaceusniger phenotypic cluster[J]. J Gen Appl Microbiol, 2004, 96:973-981. [12].Khamna S, Yokota A, Lumyong S. Actinomycetes isolated from medicinal plant rhizosphere soils: Diversity and screening of antifungal compounds, indole-3-acetic acid and siderophore production[J]. J Microbiol Bio- technol, 2009, 25:649-655. [13].Istianto Y, Koesoemowidodo R S A, Saputra H, et al. Application of phenol pretreatment for the isolation of rare Actinomycetes from Indonesian soil[J]. Microbiology (Indonesia), 2012(6):42-47. [14].Alferova I V, Terekhova L P. Use of the method of enriching of soil samples with calcium carbonate for isolation of Actinomyces[J]. Antibiot Khimioter, 1988, 33: 888-890. [15].Tsao P H, Leben C, Keitt G W. An enrichment method for isolating Actinomycetes that produce diffusible antifungal antibiotics[J]. Phytopathology, 1960, 50:88- 89. [16].Qin S, Li J, Chen H H, et al. Isolation, diversity, and antimicrobial activity of rare Actinobacteria from medicinal plants of tropical rain forests in Xishuangbanna, China[J]. Appl Environ Microbiol, 2009, 75:6176-6186. [17].Tiwari K, Gupta R K. Diversity and isolation of rare Actinomycetes: An overview[J]. Crit Rev Microbiol, 2012, 39:256-294. [18].Ferriss R S. Effects of microwave oven treatment on microorganisms in soil[J]. Phytopathology, 1984, 74:121- 126. [19].Bulina T I, Alferova I V, Terekhova L P. A novel approach to isolation of Actinomycetes involving irradiation of soil samples with microwaves[J]. Micro- biology, 1997, 66:231-234. [20].Bredholdt H, Galatenko O A, Engelhardt K, et al. Rare Actinomycete bacteria from the shallow water sediments of the Trondheim fjord, Norway: Isolation, diversity and biological activity[J]. Environmental Microbiology, 2007, 9(11):2756. [21].Hayakawa M, Otoguro M, Takeuchi T, et al. Application of a method incorporating differential centrifugation for selective isolation of motile Actinomycetes in soil and plant litter[J]. Antonie Van Leeuwenhoek, 2000, 78:171- 185. [22].Qin S, Li J, Chen H H, et al. Isolation, diversity, and antimicrobial activity of rare Actinobacteria from medicinal plants of tropical rain forests in Xishuangbanna, China[J]. Appl Environ Microbiol, 2009, 75:6176-6186. [23].Maldonado L A, Stach J E, Pathomaree W, et al. Diversity of cultivable actinobacteria in geographically widespread marine sediments[J]. Antonie van Leeuwenhoek, 2005, 87:11-18. [24].Palleroni N J. A chemotactic method for the isolation of Actinoplanceae[J]. Arch Microbiol, 1980, 128:53. [25].Hayakawa M. Studies on the isolation and distribution of rare Actinomycetes in soil[J]. Actinomycetol, 2008, 22: 12-19. [26].Hong K, Gao A H, Xie Q Y, et al. Actinomycetes for marine drug discovery isolated from mangrove soils and plants in China[J]. Mar Drugs, 2009, 7:24-44. [27].Subramani R, Aalbersberg W. Culturable rare Actinomycetes: Diversity, isolation and marine natural product discovery [J]. Appl Microbiol Biotechnol, 2013, 97(21):9291-9321. [28].Magarvey N A, Keller J M, Bernan V, et al. Isolation and characterization of novel marine-derived Actinomycete taxa rich in bioactive metabolites[J]. Appl Environ Microbiol, 2004, 70:7520-7529. [29].Mincer T J, Fenical W, Jensen P R. Cultured and culture-independent diversity within the obligate marine actinomycete genus Salinispora[J]. Appl Environ Micro- biol, 2005, 71:7019-7028. [30].Hayakawa M, Nonomura H. Humic acid-vitamin agar, a new medium for the selective isolation of soil Actinomycetes[J]. J Ferment Technol, 1987, 65:501-509. [31].彭云霞, 姜怡段, 淑蓉, 等. 稀有放线菌的选择性分离方法[J]. 云南大学学报自然科学版, 2007, 29(1)86- 89. [32].Tamaki H, Sekiguchi Y S, Hanada K, et al. Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques[J]. Appl Environ Microbiol, 2005, 71:2162-2169. [33].Gavrish E, Bollmann A, Epstein S, et al. A trap for in situ cultivation of filamentous actinobacteria[J]. Journal of Microbiological Methods, 2008, 72(3):257-262. [34].Okami B, Hotta A K. Search and discovery of new antibiotics[C]//Goodfellow M, Williams S T, Mordarski M. Actinomycetes in biotechnology, London: Academic Press, 1988:33-67. [35].Qiu D, Ruan J, Huang Y. Selective isolation and rapid identification of members of the genus Micromonospora [J]. Appl Environ Microbiol, 2008, 74:5593-5597. [36].Bian J, Li Y, Zhang L X, et al. Amycolatopsis marina sp. nov., an Actinomycete isolated from an ocean sediment[J]. Int J Syst Evol Microbiol, 2009, 59:477-481. [37].Williams S T, Wellington E M H. Principles and problems of selective isolation of microbes[C]//Bullock J D, Nisbet L J, Winstanley D J. Bioactive microbial products I: Search and discovery. London: Academic Press, 1982:9-26. [38].Mincer T J, Jensen P R, Kauffman C A, et al. Widespread and persistent populations of a major new marine actinomycete taxon in ocean sediments[J]. Appl Environ Microbiol, 2002, 68:5005-5011. [39].Jensen P R, Gontang E, Fenical W, et al. Culturable marine actinomycete diversity from tropical Pacific Ocean sediments[J]. Environmental Microbiology, 2005, 7(7):1039-1048. [40].Keller M, Zengler K. Tapping into microbial diversity[J]. Nature Reviews, 2004(2):141-150. [41].Bruns, Heribert C, JErg O. Cyclic AMP and acyl homoserine lactones increase the cultivation efficiency of heterophic bacteria from the central Baltic sea[J]. Appl Environ Microbiol, 2002, 68:3978-3987. [42].Hame?-Kocaba? E E, Uzel A. Isolation strategies of marine-derived actinomycetes from sponge and sediment samples[J]. Journal of Microbiological Methods, 2012, 88(3): 342-347. [43].Zengler K, Toledo G, Keller M, et al. Cultivating the uncultured[J]. PNAS, 2002, 99:15681-15686. [44].Kaeberlein T, Lewis K, Epstein S S. Isolating ‘uncultivable’ microorganisms in pure culture in a simulated natural environment[J]. Science, 2002, 296: 1127-1129. [45].Epstein S S. 未培养微生物[M] 刘巍峰译济南 山东大学出版社, 2010:210-214. [46].Lewis K, Epstein S S, D’Onofrio A, et al. Uncultured microorganisms as a source of secondary metabolites[J]J Antibiot, 2010, 63:468-476. [47].Hirsch C F, Christensen D L. Novel method for selective isolation of actinomycetes[J]. Applied and Environmental Microbiology, 1983, 46(4):925-929. |
| 备注/Memo: | 收稿日期: 2013?10?18. 宁波大学学报（理工版）网址: http://journallg.nbu.edu.cn/ 基金项目: 国家自然科学基金（41306134）. 第一作者: 原野（1987－）, 男, 陕西西安人, 在读硕士研究生, 主要研究方向: 海洋生物学. E-mail: 23yuanye@163.com *通信作者: 何山（1982－）, 男, 广东韶关人, 博士/副教授, 主要研究方向: 海洋微生物药物与生物技术. E-mail: heshan@nbu.edu.cn 宁波大学学报（理工版）网址：http://journallg.nbu.edu.cn/ |
